PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000494.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bZIP

Protein Properties

Length: 150aa MW: 17379.3 Da PI: 6.2711

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000494.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.7	2.1e-12	71	122	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++ rr+++NRe+ArrsR RK+++++eL ++ L + N++L + l++l + Cse_sc000494.1_g070.1 71 RKRRRMISNRESARRSRVRKQKQLDELLSQMARLRSDNQSLVEHLNNLLESH 122 5789**************************************9888886655 PP

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence
MAPQVSQFQY LTPQDNSTNF YIQDPISVLH MTDFVTNIPD QCFSSNPSSL SNTSSTSDEA 60 DEQQISIISE RKRRRMISNR ESARRSRVRK QKQLDELLSQ MARLRSDNQS LVEHLNNLLE 120 SHERAVDENA RLKEETTDIK RKLVELQLAN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	75	RKRRR
2	71	92	RKRRRMISNRESARRSRVRKQK
3	84	90	RRSRVRK
4	84	91	RRSRVRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	1e-30	bZIP family protein