PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000501.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 304aa    MW: 34739.3 Da    PI: 8.4278
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000501.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.5e-05232254123
                            EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                            + C++C+k+F  + + ++H +++
  Cse_sc000501.1_g070.1 232 FMCHKCDKMFAVRGDWRTHEKNC 254
                            89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MITDQPYSTY LNPSWFILNN NQYLSSSSSF VHHPPSPPLK EALPLLSLSP TKNPNPYQQN  60
PSTTTNDPYF HESSVPVSLH LGLPSLTLPA EADLISRLST KDSHEGEYKE QVQEGKKITG  120
FATCTSTINK GQYWIPTPYQ ILIGPNQFSC HICCKTFNRY NNMQMHMWGH GSQYRRGPES  180
LRGRQPTAML RLPCYCCAPG CSNNIDHPRA KPLKDFRTLQ THYKRKHGDK PFMCHKCDKM  240
FAVRGDWRTH EKNCGKLWYC NCGSDFKHKR SLKDHVKAFG KGHGAFEFND CSFDEDEGVS  300
EIEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-115C2H2 family protein