PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000502.1_g140.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 322aa MW: 37090.1 Da PI: 10.2791

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000502.1_g140.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	34	9.4e-11	93	148	47	90
FAR1 47 k............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k ++ +rr+ra++r+gCka l+++++ ++k++v+++ ++HnH+l+ Cse_sc000502.1_g140.1 93 KtdppsydiaeviKVIKRRKRASQRCGCKALLRLRQTPENKFVVYTFFEKHNHSLV 148 13566667777777889*************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MSNSIEDDSM QGEPSTPRST NTVQDNVVDA ESVTQVGSYQ PTPPGSKFWI PEAKNKPVEG 60 TQFDTIEQAL KFYKEVGVKP SSKDDISKKD KSKTDPPSYD IAEVIKVIKR RKRASQRCGC 120 KALLRLRQTP ENKFVVYTFF EKHNHSLVHE NDYKYLWAAR KLTFSKQHLL RQLSNANIGP 180 TRAWKVMIEM YGGFENIGVT DVECRNYRRG LDNFIGNRDA QMVVEKLLSR QEFFSDFSVE 240 YKQHKKEKTL IGLFWADSQA KLNYAAFGDV VSFDATFSPS KPIFKPKTCR RKRNAAELKK 300 PVNRYNRTKA KHNQNTKRIR GD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-23	FAR1 family protein