PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000504.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 247aa    MW: 28171.6 Da    PI: 6.7728
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000504.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-151461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg+W++eEd+ll + ++ +G g+W++ +++ g+ R++k+c++rw +yl
  Cse_sc000504.1_g050.1 14 RGAWSAEEDKLLTNHIQTYGEGQWRSLPSKAGLLRCGKSCRLRWVNYL 61
                           89******************************99************97 PP
2Myb_DNA-binding51.72e-1667111147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rg++T +E e +++++  +G++ W+ Ia +++ gRt++++k++w+ +
  Cse_sc000504.1_g050.1  67 RGNFTSDESEAIIRLHSIHGNR-WSHIATELP-GRTDNEIKNYWNAH 111
                            89********************.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MGRTPCCSKV GLHRGAWSAE EDKLLTNHIQ TYGEGQWRSL PSKAGLLRCG KSCRLRWVNY  60
LRPGIKRGNF TSDESEAIIR LHSIHGNRWS HIATELPGRT DNEIKNYWNA HLKRTLQNPS  120
YQLTKTKKKP RKKRNLEDKK QEPTNSQQKS TEVLKAVEPV PATSSSSGAS SSCTFNFIDD  180
DFDLSWSDLT PFMEVESTSV MDDQGFECFL MDGCDLLMSK DDENVMLEKL YYEYQDLLSY  240
EGVDGVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.15e-62MYB family protein