PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000523.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 211aa    MW: 23847.6 Da    PI: 10.1798
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000523.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.75.3e-13137184148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            +g+WT eEdell  ++++ G g+W + +++ g+ R++k+ +++w +yl
  Cse_sc000523.1_g020.1 137 KGPWTREEDELLSSYIARKGEGQWQALPKKAGLLRCGKSYRLHWMNYL 184
                            79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
LRLWFHDDMG LPIGVLRLRP KGGHGSHNGM KSVIYHFHGN QEFARLKIGI GKPPGEMDPK  60
AFLLQNFNAT AQERSNVGLK EGVAALEVLL TKGVEESARV FNNEQKYKHL KVPENADMSA  120
HLCVLEMRNV LSAFVKKGPW TREEDELLSS YIARKGEGQW QALPKKAGLL RCGKSYRLHW  180
MNYLRSSVKR GHISADEEGL IIRLHCLLGN R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.18e-35MYB family protein