PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000533.1_g100.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 234aa    MW: 26455.9 Da    PI: 10.0705
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000533.1_g100.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.51.2e-11151194854
                    AP2   8 wdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                            +++k+g W++eIrdp +   r r++lg f+t+eeAa+ ++ a+ +++
  Cse_sc000533.1_g100.1 151 RKRKWGEWAVEIRDPLK---RVRVWLGFFDTKEEAARPYDVAAIRIR 194
                            5667**********754...5**********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MLRLKVACEK AKRGLSSAIL APIDIDCLYE GVDFCIKNSR AKFEELNSTY FDKCIQIVEK  60
CLCDGAMKKK DVDEVVVFGG SSRIPNVQQL VADFFYGKTL CKSLNSDEAV ASRAAILATR  120
LIGNDDNMMK DVGSKSMKFN EQHDNRSCSS RKRKWGEWAV EIRDPLKRVR VWLGFFDTKE  180
EAARPYDVAA IRIRDDKLIF PTKARPAKPK RRKQASKVTI PTTGLIKLII ITKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.12e-17ERF family protein