PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000533.1_g120.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 256aa MW: 29095.2 Da PI: 8.4553

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000533.1_g120.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.5	2e-30	11	65	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt+eLH+ F +av+qLGG+++AtPk il++m++ gLt++hvkSHLQkYR+ Cse_sc000533.1_g120.1 11 KERLKWTQELHDLFEKAVNQLGGPDRATPKGILKTMGITGLTIYHVKSHLQKYRM 65 68****************************************************8 PP
2	Myb_DNA-binding	62.8	6.7e-20	13	64	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++l+ +av+qlGg+ t+k I +tmg +g+t +++ks++qky+ Cse_sc000533.1_g120.1 13 RLKWTQELHDLFEKAVNQLGGPdraTPKGILKTMGiTGLTIYHVKSHLQKYR 64 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MGMNRSDGSG KERLKWTQEL HDLFEKAVNQ LGGPDRATPK GILKTMGITG LTIYHVKSHL 60 QKYRMSKFIP ESTKGEKCEK KSIQEMFPNF SKTSGIQLNE ALHMQMEVER RLNDQLEVQK 120 NLKLKIEAQS RFLERIAQDY KARPMIAKSN KPISLPSLPS LCEESDSIVK DFDSDSEVET 180 SHMTYSQEPR PAKRARVVLI DDIESPEMFN LNSKNYTQSI LLPKGGNTFD SQDSIFPWSI 240 AYCHSPLIPA SHNSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-52	G2-like family protein