PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000539.1_g130.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HB-other
Protein Properties Length: 164aa    MW: 19105.8 Da    PI: 10.9821
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000539.1_g130.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.51.3e-0931731355
                           HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
               Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55
                           e+L ++F++n++p+++++ +LA+k+gL+ ++++ WF   R +e
  Cse_sc000539.1_g130.1 31 EILTDFFQRNQNPNKQQKIDLATKVGLDLEKITRWFSDTRFQE 73
                           79**********************************9999765 PP
2Homeobox17.56.9e-06891191343
                            HHHHHHHHHSSS--HHHHHHHHHHCTS-HHH CS
               Homeobox  13 eeLeelFeknrypsaeereeLAkklgLterq 43 
                            ++L  +F+++++ps +e+  L+k++gL+ + 
  Cse_sc000539.1_g130.1  89 KILSHFFQSKQNPSPKEISSLSKQVGLDGKM 119
                            6899***********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MNHTTQSLPS VIFRCCSFRL DNGGLDYFHN EILTDFFQRN QNPNKQQKID LATKVGLDLE  60
KITRWFSDTR FQENKKRGKG HSSGTAVEKI LSHFFQSKQN PSPKEISSLS KQVGLDGKMI  120
LTDFFQRNQY PTNRRKLIWQ RRIPAGSPIN AFKKTKRGKK REES