PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000635.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 174aa    MW: 18900.1 Da    PI: 7.6233
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000635.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB178.37.3e-5626119295
                  NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 
                            reqdrflPian+srimkk lPan+ki+kdak+tvqecvsefisfvtseasdkcq+ekrktingddllwa+atlGfedy++plk+yl++
  Cse_sc000635.1_g040.1  26 REQDRFLPIANISRIMKKGLPANGKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLSR 113
                            89************************************************************************************** PP

                  NF-YB  90 yreleg 95 
                            yre ++
  Cse_sc000635.1_g040.1 114 YREGDT 119
                            **9665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MADVPGSPAG GSHESGGEQS PHSNIREQDR FLPIANISRI MKKGLPANGK IAKDAKDTVQ  60
ECVSEFISFV TSEASDKCQK EKRKTINGDD LLWAMATLGF EDYIDPLKAY LSRYREGDTK  120
GSARGGDGSG KKDAVGSQLV PNAQYTHQGS FAQGMNFLNS HPRRHELVPY ASLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.13e-81NF-YB family protein