PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000718.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 225aa    MW: 24707.9 Da    PI: 6.351
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000718.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.31.6e-10123193368
                   FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkv 68 
                            Y +YA+++GF v+ks +k+  r+g ++++ +vC++eg ++  + +      ++k++r+++ + tgCka+ + 
  Cse_sc000718.1_g070.1 123 YMKYASKAGFVVKKSCQKRL-RSGIVKQKYLVCNREGCPKGIHVDtldleiSDKQNRSSNLHITGCKARAMF 193
                            99*********999988887.8899**************9988888999999999999999*******8765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDSIPNSSVS SDRSSSYQEI GATELSSSSE NIVVSDLPST TEDIVVSDDV SAKYTEEIVA  60
YEHGDESAAI KKLNALKTPE SFSTHSNFDT PGGTVYYIPK VHVDVLLAKG NVYNSVDECI  120
SAYMKYASKA GFVVKKSCQK RLRSGIVKQK YLVCNREGCP KGIHVDTLDL EISDKQNRSS  180
NLHITGCKAR AMFEFVTPPN YLFCSGMEFL GLTVIASKLQ LYRTT