PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000721.1_g100.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 215aa    MW: 23479.8 Da    PI: 6.6474
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000721.1_g100.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260136.31.1e-42591581100
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                            +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++kll++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q++
  Cse_sc000721.1_g100.1  59 PCAACKILRRRCVEKCVLAPYFPPTDPIKFTIAHRVFGASNIIKLLQELPESQRADAVSSMVYEANARLRDPVYGCAGAICQLQKQVS 146
                            7*************************************************************************************** PP

                 DUF260  89 qlkaelallkee 100
                            +l+aela++++e
  Cse_sc000721.1_g100.1 147 ELQAELAKAQAE 158
                            ********9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MEYSGDRNGS ATSPMAIVSN SHSPKKTTSN NNSTSSSSQL SPSSVLTPPS PPHPVVLSPC  60
AACKILRRRC VEKCVLAPYF PPTDPIKFTI AHRVFGASNI IKLLQELPES QRADAVSSMV  120
YEANARLRDP VYGCAGAICQ LQKQVSELQA ELAKAQAEVL NMQCQHSNLL SMICMEMDQQ  180
LVSPPTTLPQ HTSYENLNFF PDDVNLGSVF EPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.12e-63LBD family protein