PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000725.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 246aa    MW: 27988.4 Da    PI: 8.644
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000725.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.5e-16112160254
                    AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                            +++GVr +k +g+W+AeIrd +     + kr++lg++ taeeA +a+ + +++++
  Cse_sc000725.1_g010.1 112 RFTGVRLRK-WGKWAAEIRDpF-----SkKRIWLGTYLTAEEASRAYTNKKEEFR 160
                            799****99.**********66.....44******************99999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MSDYNNSRLT KRFKQTIINK QQEKSQFTGK NLRKIRVICS DPEATDSSSD ESDDVITTNN  60
KPRSPRRIVC EIVISDPPNK TDDVITRKDD VMSSKDDVIT EENNKQEFNK KRFTGVRLRK  120
WGKWAAEIRD PFSKKRIWLG TYLTAEEASR AYTNKKEEFR ARMLVSGRPG PVRELDPEIE  180
ASKALQSMKY GKRVGSETGS GSGQGSDVEE ENKPPWKGMG VDMLVIDNNG NLMGEFSKLD  240
DDLNIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.14e-18ERF family protein