PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000731.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 166aa    MW: 19518.5 Da    PI: 9.2297
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000731.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.23.4e-061033223
                           EETTTTEEESSHHHHHHHHHH..T CS
                zf-C2H2  2 kCpdCgksFsrksnLkrHirt..H 23
                           kC  C + F+rk++L+ H+rt  H
  Cse_sc000731.1_g080.1 10 KCAACYRQFNRKEHLVEHMRTsyH 33
                           6999****************9777 PP
2zf-C2H213.90.000164057320
                           ETTTTEEESSHHHHHHHH CS
                zf-C2H2  3 CpdCgksFsrksnLkrHi 20
                           C++Cgk++++ ++L+ H+
  Cse_sc000731.1_g080.1 40 CGYCGKRCRSFESLREHL 57
                           *****************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MDSSNTLRNK CAACYRQFNR KEHLVEHMRT SYHSFHEPMC GYCGKRCRSF ESLREHLIGP  60
LPKAECERMF RDRGCDICLN IFSSRNAVRV HRDTCQLSYG NSPEYLRDAM PLRPVHRKIQ  120
DFLCNGEPIW KIRPRGGKAR ILVGHGLDHD LRCLELEYPR VKIRQA