PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000753.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

YABBY

Protein Properties

Length: 204aa MW: 22651.3 Da PI: 4.6256

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000753.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	193	1.3e-59	11	172	6	165
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnveke 89 + e++CyvqC+fC+t+l+vsvP+++l++vvtv+CGhCtsllsvn++ +s + s ld++ ++ l ++ee ++ +++ Cse_sc000753.1_g070.1 11 QQEEICYVQCGFCTTVLLVSVPYSCLSMVVTVKCGHCTSLLSVNMMRSSffplH---LFSSLDNQEEPMLEVSGENEEVPTQIPLSNH 95 6799***************************************999864444...4555555655555555555555555555555 PP YABBY 90 esastsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPk 165 +s+s +ss++ +e++d+++ v + v++PPekr r+Psayn+fikeei r+k++ P+++h++afs+aaknWah P+ Cse_sc000753.1_g070.1 96 SSSSPLISSSSSDEDNDDDLELVNHiVNKPPEKRLRAPSAYNKFIKEEIGRLKTQHPNMTHKQAFSTAAKNWAHSPQ 172 556666666666667777776666669*********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MSTLNHLLDL QQEEICYVQC GFCTTVLLVS VPYSCLSMVV TVKCGHCTSL LSVNMMRSSF 60 FPLHLFSSLD NQEEPMLEVS GENEEVPTQI PLSNHSSSSP LISSSSSDED NDDDLELVNH 120 IVNKPPEKRL RAPSAYNKFI KEEIGRLKTQ HPNMTHKQAF STAAKNWAHS PQGQHDDEDE 180 EKAKCSGDES TAIIKELGSN DQPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	1e-52	YABBY family protein