PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000818.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 251aa    MW: 27328 Da    PI: 10.1099
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000818.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.71.7e-07108129426
                            ---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                            ++C +fa+ G C+yG  CkF H+
  Cse_sc000818.1_g020.1 108 RPCINFAK-GSCRYGIGCKFVHD 129
                            69******.*************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MTGSTETPIV SLSDKLAKGR QDHPLLDLFD SIRFTTKKLV NARPKSAQAA WDFISDLVKD  60
NKRPRTSALK SELRSIKLVD SSSSSPLVLM ADKGMPCNPT NPQVKSWRPC INFAKGSCRY  120
GIGCKFVHDG NVKNPSNTIV SKVTNNTEDA ILNFLTRLGI TGSQSLPTVQ TSNTIRPNTT  180
PTAYFTYHSP TGPFPYNPSP SIRPTDAIGP PPGFGPPTAH HPFTTYPGPH YLTTQPITPH  240
HSTHYPPAAP I