PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000840.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YC
Protein Properties Length: 144aa    MW: 15790.1 Da    PI: 10.2578
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000840.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC90.91.2e-28821431475
                  NF-YC  14 tdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlk 75 
                            +   +h+l larikki+kad+dv+misaea +++++ace+fileltlrsw+h+ee+k  t k
  Cse_sc000840.1_g080.1  82 ATTTDHSLTLARIKKIMKADKDVRMISAEAAIVFARACEMFILELTLRSWNHSEEKKEDTPK 143
                            45569***************************************************999866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MDPQGHGQPQ GSNIMTNIPQ LPYAKNPYTQ TQISGTPGRG PIVPPGGVAL QAATQPTAAQ  60
LTQQRLAYHK IQQQLTRAAT SATTTDHSLT LARIKKIMKA DKDVRMISAE AAIVFARACE  120
MFILELTLRS WNHSEEKKED TPKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.31e-29NF-YC family protein