PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000876.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 284aa    MW: 31286.1 Da    PI: 6.6391
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000876.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.29.1e-1485129347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT++E++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
  Cse_sc000876.1_g020.1  85 PWTEDEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 129
                            8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MMMTSADESS DEIMLFGVRV KVDPMRKSVS MNDLTHYLHL QTPLVADDNN AGYGSSDDVI  60
VPDHRSNNGS PAPAGGARDR KRGVPWTEDE HKLFLLGLQK VGKGDWRGIS RNFVKTRTPT  120
QVASHAQKYF LRRSNLNRRR RRSSLFDMTT DSVGAEEQLS EDNTNKAASP QISPLSGFPM  180
ATFPATVSPV PSRVPAENQM ETVTFSNYDQ INAAPVLPVH PIAVLPTPDT SSMTDLNMIQ  240
KQEMDSLSLS LNLSLSYDHN NRMDSSPYQA MPSFKSGDGL ISVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.24e-51MYB_related family protein