PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000877.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 260aa MW: 29557.9 Da PI: 6.2442

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000877.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	81.5	1.3e-25	47	145	2	103
HHHHHHHHHCTGGGTTTSEESSSS......SEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEE CS HSF_DNA-bind 2 Flkklyeiledeelkeliswseng......nsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkh 83 F++kly+++ ++e++++isw n +sf++++++ef +kvLp + k +nf SF+ QLn YgFkk++ + e++h Cse_sc000877.1_g050.1 47 FVNKLYNMVCNKETESIISWVPNLdvsdgaKSFAIWNNDEFINKVLPLMSKSNNFDSFITQLNNYGFKKMSWDC---------REYAH 125 9*****************86544556679************************************988.........57* PP SXXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 84 ksFkkgkkellekikrkkse 103 ++F++gk +ll+++kr++++ Cse_sc000877.1_g050.1 126 EWFQEGKPHLLKNVKRRRKQ 145 ****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MEGIDVDETM VVSDLSEGFS SGNEGGDGDE LLAEPVRGVR NGALPPFVNK LYNMVCNKET 60 ESIISWVPNL DVSDGAKSFA IWNNDEFINK VLPLMSKSNN FDSFITQLNN YGFKKMSWDC 120 REYAHEWFQE GKPHLLKNVK RRRKQTISES EKLHREIKRF ESASKEQDNE LNTFKSYVDN 180 TISNHKRILQ TMARAIKSTI DHHHQVRKMH GVENNNDATQ NMTLVGQQSH KTSVLGESSF 240 APSCEIQAED KSAKNTTENN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	142	LKNVKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-26	HSF family protein