PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000897.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 204aa    MW: 23012 Da    PI: 8.4685
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000897.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.32.9e-164090155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           + y+GVr +    +Wv+e+r+ps+   ++r++lg+f t+e+Aa+a++aa + l+g
  Cse_sc000897.1_g030.1 40 PVYRGVRLRN-GSKWVCEVREPSK---KTRIWLGTFPTPEMAARAYDAATLTLRG 90
                           68*****998.899*******864...6*********************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MEIIKDDGSS SSSSSQTETC TKNLPKRKAG RKKFKETRHP VYRGVRLRNG SKWVCEVREP  60
SKKTRIWLGT FPTPEMAARA YDAATLTLRG DEAPLNFPDS VHLIRRAKSC SARDIQDAAL  120
EASLAFRPQH TNEMPSTSSP FIKTEGNDKM VLDTGFVDEE ALFNTPVFYN NLAEGLVITP  180
PGMKKGFDWN DDIEPNIDLN LWRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.14e-55ERF family protein