PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000907.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 451aa MW: 50535.7 Da PI: 5.0472

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000907.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.8	9.9e-35	22	113	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl k+ye+++d++++e++sws+++nsfvv+++ efa+ +Lp yFkhsnf+SF+RQLn+YgF+k++ e+ weF+++ F k+ Cse_sc000907.1_g050.1 22 FLLKTYEMVDDNTTDEIVSWSTRENSFVVWNPPEFARVLLPMYFKHSNFSSFIRQLNTYGFRKIDPEK---------WEFANEDFLKD 100 9**************************************************************999.........******* PP XXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkks 102 kk+ll++i+r+k Cse_sc000907.1_g050.1 101 KKHLLKNIHRRKP 113 ********985 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MDPNPPSSST ATTTTGGGPA PFLLKTYEMV DDNTTDEIVS WSTRENSFVV WNPPEFARVL 60 LPMYFKHSNF SSFIRQLNTY GFRKIDPEKW EFANEDFLKD KKHLLKNIHR RKPVHSHSPQ 120 TSTVDPERAA FEEEIDKLTR EKTSLEKNLL RYKQQQPASK LQLEDLTQRV NSMEQRQDTL 180 LTFLKNAAQN PEFVEHLAQK LESMDFSADN KKRRLPKSRV FSDDGVVDNY SPQSPARPDF 240 GNVSHHDFSG KLRLELSPAV SDVNFVSYST QSSNEDGGSS QIRLSEGCTR TTEVTPDRLL 300 ELSDTCTSFG FNRGYSLTHK TGPTFDTNEE TEGHPSCQLN LTLASSVSQI NPCQDNDAIP 360 QSFEDIGKPP SENVPSNPKP ANNAALAVTI AVPARVNDVF WEQFLTERPG SSDVEDTSSN 420 LKSTTPSNEQ DDRRSGIGSY GNSSNLQNLT L

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MDPNPPSSST ATTTTGGGPA PFLLKTYEMV DDNTTDEIVS WSTRENSFVV WNPPEFARVL  60
LPMYFKHSNF SSFIRQLNTY GFRKIDPEKW EFANEDFLKD KKHLLKNIHR RKPVHSHSPQ  120
TSTVDPERAA FEEEIDKLTR EKTSLEKNLL RYKQQQPASK LQLEDLTQRV NSMEQRQDTL  180
LTFLKNAAQN PEFVEHLAQK LESMDFSADN KKRRLPKSRV FSDDGVVDNY SPQSPARPDF  240
GNVSHHDFSG KLRLELSPAV SDVNFVSYST QSSNEDGGSS QIRLSEGCTR TTEVTPDRLL  300
ELSDTCTSFG FNRGYSLTHK TGPTFDTNEE TEGHPSCQLN LTLASSVSQI NPCQDNDAIP  360
QSFEDIGKPP SENVPSNPKP ANNAALAVTI AVPARVNDVF WEQFLTERPG SSDVEDTSSN  420
LKSTTPSNEQ DDRRSGIGSY GNSSNLQNLT L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-135	HSF family protein