PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000926.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 236aa    MW: 26280.6 Da    PI: 7.2908
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000926.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.5e-057496123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           y+C+ C++ F++   L  H+++H
  Cse_sc000926.1_g080.1 74 YTCTFCKREFRSAQALGGHMNVH 96
                           9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MDENGAMIYK SIDKSNGVEG SKVGVRATNK GSLSYTKDAM IDHNNGDDID GGGSLGDEGD  60
HDMLCELSWP PRSYTCTFCK REFRSAQALG GHMNVHRREK ARLKQLPTPR YLSFLHPQSH  120
HLSSHSKVLD LNLGSNPNPN ISTWLDSNKP SFPKMFPSFT SSFCPPKSDP CTFHPLCSSN  180
FASFSALRSK RSGLKFDGFD DFVHDKEGMI VKKMEAGLLV ESKFDDLDLE LRLGWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.16e-22C2H2 family protein