PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000932.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 149aa    MW: 16927.4 Da    PI: 10.0133
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000932.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-085293245
                           SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                           g+++ +E  l++++++ lG++  + Ia+++  gRt+  +k++w 
  Cse_sc000932.1_g060.1 52 GSFSLQEAALIIELHNILGNK-RAQIASYLA-GRTDSAVKNFWI 93
                           67999****************.*********.***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
RYGITLPFFR HTTYGRHGCW SSIPNLASGL QRCGKSWRLR WNNYLRPGLK IGSFSLQEAA  60
LIIELHNILG NKRAQIASYL AGRTDSAVKN FWISNTKKKL IQFQLQTIND QARHADATLP  120
SVKPDQETEN EVDLDVVVVG FMDNKLIDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.22e-39MYB family protein