PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000936.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 260aa MW: 29594.8 Da PI: 4.6816

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000936.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36	1.8e-11	22	103	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt +e l L++ +e + r + + ++W+ + +++ + ++r+ +qC+ kw++l +ykkik++ +k++ s + +f+ +e Cse_sc000936.1_g030.1 22 WTVEESLILVNEIAAIEADCRGTLSSFQKWKIIVENCNALEVNRNLNQCRRKWDSLLSDYKKIKQSGSKKA---SFNNELFKAIE 103 *****************************************************************999963...44556777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MDHHETGTTS SLRTRSKAAP DWTVEESLIL VNEIAAIEAD CRGTLSSFQK WKIIVENCNA 60 LEVNRNLNQC RRKWDSLLSD YKKIKQSGSK KASFNNELFK AIERYVREFE EGGGRDYDTD 120 PEDGDEDDGM DLPPADAVHF GSKNQRPKVT APQKRTVEVK PKLVRHPKSE DMEIEECSSE 180 QRVDRHTNTF DENTGYVQIS REEQEQILGE KLRENAELIE AIVSGNNSTY DVTRMNGDKI 240 IICLNNLAVT LDELSKLQTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	3e-41	Trihelix family protein