PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001023.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 290aa    MW: 32408.7 Da    PI: 8.1496
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001023.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.31.1e-151461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg+WT+ Ed++l d++k++G g W+  + + g++R++k+c++rw++yl
  Cse_sc001023.1_g030.1 14 RGSWTASEDKILSDYIKLHGEGKWRQLPIKAGLKRCGKSCRLRWLNYL 61
                           89********************************************97 PP
2Myb_DNA-binding47.25.1e-1567111147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ 
  Cse_sc001023.1_g030.1  67 RGNISCDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 111
                            5677779***************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MGRSPCCTKI GLNRGSWTAS EDKILSDYIK LHGEGKWRQL PIKAGLKRCG KSCRLRWLNY  60
LKPDIKRGNI SCDEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT TLAKKVHDLH  120
HNDQINLVSN QSQEQLKKSK DKECVNETDT NVVTTKAVRC SGTHFSPCPQ QIQPPRSNFV  180
EIKDPANPKP IEPAAAFPFY HTDTFTSNNN PSSFNLDVNM GEGDCLSGLF NMDFPSSFNL  240
NNQMVKGGDM LSGTSTTAVA ADATQALSKE ILDYYFSSIP EIGGEWLSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.13e-60MYB family protein