PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001086.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 367aa    MW: 41555.1 Da    PI: 6.2617
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001086.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK56.17.1e-181331661952
                 RWP-RK  19 kdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                            ++ +k L vc+T+LKriCR++GI+RWP+Rkik++
  Cse_sc001086.1_g010.1 133 NSNSKVLLVCPTTLKRICREHGIMRWPSRKIKKV 166
                            56688999************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MDDQLGSFTP KTISMFGAIK ESSLISVDDK SYDFSFSNPS DSSSSYLHSY PNLSQRYFDD  60
ETDVKPFRTS PVDYPLTDTF FNDQTPEKRF TQAIKYLNEF TRDTEILIQL WLPVRKEGSE  120
CVLTTEDQPF ILNSNSKVLL VCPTTLKRIC REHGIMRWPS RKIKKVGHSL KKLQLIIDSV  180
QGAEGTIQLG SFYTNFPELS STPKPTNDSA HLLASQKTSG SSSCCSDISG PPLGISKVNT  240
LYAQKPSGLH NKPAQDEGKS LLLKKEDVFR VKVVNGEKKI RMCMSRDWNF EELQRAIMMR  300
FNIDVMNSVT LKYLDDDSEW VLLTCDADLE ECMDINIASK KCTIQLFLNQ SFHLESRSSF  360
TGNGPSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20640.25e-45Nin-like family protein