PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001101.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 433aa MW: 49017.8 Da PI: 8.5225

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001101.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	103.7	1e-32	41	100	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ +cprC+s++tkfCyynnys+sqP +fCk+Crr+Wt+GG lr++PvGgg+ kn k++ Cse_sc001101.1_g060.1 41 SQQHPCPRCQSHDTKFCYYNNYSTSQPCHFCKSCRRHWTRGGVLRDIPVGGGTSKNAKRQ 100 67899**************************************************98865 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MQSPPHSPNT TITTTTITTT TTTNNHQKTS TFITTTKRQL SQQHPCPRCQ SHDTKFCYYN 60 NYSTSQPCHF CKSCRRHWTR GGVLRDIPVG GGTSKNAKRQ KLINLTTSGY VTTSSLVEYW 120 ILVSPPPVDA ARNVMVPFEE NEFMSWLELA GFENGVWPFC AISILLFIDL LWSLNFSSAT 180 TPSCQTPFFA STSSGSSLYL ATPPSCQVPE PTPRSPVNFA NSTSNPIPLS ESPSRERNLA 240 SLKRFRSSSP IPLSPSFKMQ MIEYMTAHSE RLAKFEEEVY RQREEMQEKM AEMMNLVKEY 300 TKTKVPEKVL VRKEDHVAPT MFVNAISIVR DKEITNETIG KDGVVEEKDI GIDENRSSCK 360 DEGKTKELDK PKTVGHYPNH EINKKTIVNQ VNNLKYNDAL RKTFLGEIKE EEYDTMPMGP 420 LYEAILKKPV AKK

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MQSPPHSPNT TITTTTITTT TTTNNHQKTS TFITTTKRQL SQQHPCPRCQ SHDTKFCYYN  60
NYSTSQPCHF CKSCRRHWTR GGVLRDIPVG GGTSKNAKRQ KLINLTTSGY VTTSSLVEYW  120
ILVSPPPVDA ARNVMVPFEE NEFMSWLELA GFENGVWPFC AISILLFIDL LWSLNFSSAT  180
TPSCQTPFFA STSSGSSLYL ATPPSCQVPE PTPRSPVNFA NSTSNPIPLS ESPSRERNLA  240
SLKRFRSSSP IPLSPSFKMQ MIEYMTAHSE RLAKFEEEVY RQREEMQEKM AEMMNLVKEY  300
TKTKVPEKVL VRKEDHVAPT MFVNAISIVR DKEITNETIG KDGVVEEKDI GIDENRSSCK  360
DEGKTKELDK PKTVGHYPNH EINKKTIVNQ VNNLKYNDAL RKTFLGEIKE EEYDTMPMGP  420
LYEAILKKPV AKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	3e-27	Dof family protein