PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001123.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 181aa    MW: 21149 Da    PI: 9.2091
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001123.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.51.2e-0928902789
                   FAR1 27 eitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
                           + + r++v skeg++   k  +++++++ +++rt+Cka ++vk  +   +  +++++ HnH+l
  Cse_sc001123.1_g080.1 28 KSYARKLVLSKEGTNLAPKVGAKSNNKKYPSKRTDCKAVFRVKYVEGRGYWYYEFVEGHNHSL 90
                           457899999******999999999**********************7777779********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MGPDIPAGEK PAYGMMYHSL EQAYEYYKSY ARKLVLSKEG TNLAPKVGAK SNNKKYPSKR  60
TDCKAVFRVK YVEGRGYWYY EFVEGHNHSL IYRDYEFIGA SSVDCKNYKR DVLDFIGKND  120
AQMLVEMLMS KKDFLPNFSF KYETGENNAL TNLFWADEYS KRNYYAFGNV MPFDATFRTN  180
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-14FAR1 family protein