PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001131.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 210aa    MW: 25173.6 Da    PI: 8.4774
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001131.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.32.8e-1441122290
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtklele 84 
                            fY++YAk  GFsvr              +r+f C +eg++e +  + +k++r+r ++r+g ka++++k+++      ++w+vt++++e
  Cse_sc001131.1_g030.1  41 FYQKYAKINGFSVRYG------------RRDFFCHREGTQEAKVVDYSKKQRNRGSSRCGSKAHMRIKLKRindifPKEWQVTQFVTE 116
                            9************987............478***************9*********************99886555689********* PP

                   FAR1  85 HnHela 90 
                            HnH l 
  Cse_sc001131.1_g030.1 117 HNHVLL 122
                            ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MKELAFDLNE IPNEEYVESH KEICTPFIGQ CFLSEEETFL FYQKYAKING FSVRYGRRDF  60
FCHREGTQEA KVVDYSKKQR NRGSSRCGSK AHMRIKLKRI NDIFPKEWQV TQFVTEHNHV  120
LLSTQEVCFL PSYRCITIED ENRILMLKEG GLSVRQIMRV MELERNVRHE ELSFLVKDVH  180
NFLNKFQRMH SKNDARDLLE YCKQTKIEXR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.11e-43FAR1 family protein