PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001139.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 238aa    MW: 27185.2 Da    PI: 6.723
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001139.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.1e-30119178159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv+rs ++p++++++YegeHnh+
  Cse_sc001139.1_g040.1 119 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQRSLDEPDLLVTIYEGEHNHK 178
                            58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MVEPSLGIDL NVTPFHKTDD TPKNNEDKLN QMNLENKKLK EMLSRVSDNH NSLQNHVSKL  60
MQERDLLASS LNKRKSGESD ECNTSGSTEN HHQGSLKRPN NGITRVYTRT DPSDKSLVVK  120
DGYQWRKYGQ KVTRDNPSPR AYYKCSFAPS CPVKKKVQRS LDEPDLLVTI YEGEHNHKST  180
DNEHETQASA VRFNSPMELG KFDDTLVEQM ANSLRRNPDF IEDLAEAISS KIFENDLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.24e-54WRKY family protein