PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001139.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 239aa    MW: 27411.7 Da    PI: 6.7931
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001139.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.24.7e-30121179259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            +Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv+rs ++p++++++YegeHnh+
  Cse_sc001139.1_g050.1 121 RDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQRSLDEPDLLVTIYEGEHNHK 179
                            7***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MVETSLGIDL NAIPIHKADD HTPDSNDDKL NQMNLENKKL KEMLTLVLDN HKSLQNHVSK  60
LMQDRNLLAS SPNKRKSGEC DECNTSMSTE NHHQGSLKRL NNGVTRVYTR TDPSDKTLVV  120
RDGYQWRKYG QKVTRDNPSP RAYYKCSFAP SCPVKKKVQR SLDEPDLLVT IYEGEHNHKS  180
TDNEHETQTS KARFNSPMEL GKFDDTLVEQ MANSLRRNPD FIEELAEAIS SKIFENEMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-53WRKY family protein