PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001162.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 325aa    MW: 37418.8 Da    PI: 5.0403
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001162.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.13.5e-5361331128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                            lppGfrFhPtdeel+ +yLk+kv+g ++el evi+ +++yk++Pw+Lp k  + +++ ew+fF++rd+ky++g+r+nratk+gyWkat
  Cse_sc001162.1_g040.1   6 LPPGFRFHPTDEELIGYYLKRKVQGLEIEL-EVIPVIELYKFDPWELPdKsFLPKRDMEWFFFVPRDRKYPNGSRTNRATKAGYWKAT 92 
                            79****************************.99**************96434556788****************************** PP

                    NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            gkd++v++ +++l g +ktLvfy+grap g +tdWvmheyrl
  Cse_sc001162.1_g040.1  93 GKDRKVMC-QSSLAGYRKTLVFYRGRAPMGDRTDWVMHEYRL 133
                            ********.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MAGSSLPPGF RFHPTDEELI GYYLKRKVQG LEIELEVIPV IELYKFDPWE LPDKSFLPKR  60
DMEWFFFVPR DRKYPNGSRT NRATKAGYWK ATGKDRKVMC QSSLAGYRKT LVFYRGRAPM  120
GDRTDWVMHE YRLCDDVSSG TPSFHGPFAL CRVTKKNDTR TSYVTSEPKM KEVGYSSNET  180
INEPLVLQTS TRMGEESNLS SPLTSYEKMS TSENEPTSSI SLNKPSIFWV SPDLILDSSK  240
EQEQPKGQEG HFEYLTQNEI LNPMGPWQPY HQLEISPSSS YSNFTEEVEP IDDLRQFGYM  300
YSGNENFTGI FGNEDHFPYE FYGGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.11e-87NAC family protein