PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001167.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 162aa    MW: 18103.8 Da    PI: 8.2875
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001167.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.21.8e-40111101100
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                            +CaaCk+++r+C+++Cv+apyf a++pkkfa vhk+FGasnv+k+l+++pe +r+da++slv+eAe r++dPvyG++g i +lq ++ 
  Cse_sc001167.1_g070.1  11 SCAACKFMKRRCTPHCVFAPYFRADEPKKFAKVHKVFGASNVTKILNEVPEPQRQDAVNSLVFEAEERLKDPVYGCIGAIASLQDKMF 98 
                            6*************************************************************************************** PP

                 DUF260  89 qlkaelallkee 100
                            ql+++la++k++
  Cse_sc001167.1_g070.1  99 QLQHDLAVAKAR 110
                            *******99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MRTQEPRSTS SCAACKFMKR RCTPHCVFAP YFRADEPKKF AKVHKVFGAS NVTKILNEVP  60
EPQRQDAVNS LVFEAEERLK DPVYGCIGAI ASLQDKMFQL QHDLAVAKAR LARCSSRTSY  120
ASCSTTSPLL MLDGEFGITS FDDFVMDQGG LTTTEFRPHP FP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.11e-62LBD family protein