PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001180.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 248aa    MW: 27723.4 Da    PI: 6.2368
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001180.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB175.65e-5528121295
                  NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 
                            reqdrflPian+srimkk +Pan+ki+kdaketvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy+eplk yl +
  Cse_sc001180.1_g020.1  28 REQDRFLPIANISRIMKKGVPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKRYLIR 115
                            89************************************************************************************** PP

                  NF-YB  90 yreleg 95 
                            yre ++
  Cse_sc001180.1_g020.1 116 YREGDT 121
                            **9665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MAEGPASPCG GGSHESSGDM SPRAGNAREQ DRFLPIANIS RIMKKGVPAN GKIAKDAKET  60
VQECVSEFIS FITSEASDKC QKEKRKTING DDLLWAMATL GFEDYIEPLK RYLIRYREGD  120
TKGSAKGQDG SASRNGMQPD LNAQVEHCKY IDLLHSRMRR VSMLLMGFLY IDYDDHPVEK  180
SCFAGRSSEQ EILTTEFWCE ADILSNFHHP NVMAFYGVVQ DGPHVTLATI TEFMVDGSLR  240
HVLLHKDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.12e-75NF-YB family protein