PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001180.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NF-YB

Protein Properties

Length: 187aa MW: 21186.7 Da PI: 8.0925

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001180.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	167.1	2.3e-52	32	127	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 +eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easd+c++ekrkt+ngdd++wa+ +lGf+dy+eplk+yl+k Cse_sc001180.1_g060.1 32 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDHCRKEKRKTVNGDDVCWAMLNLGFDDYAEPLKKYLHK 119 89************************************************************************************ PP NF-YB 90 yrelegek 97 rel+ge+ Cse_sc001180.1_g060.1 120 IRELDGER 127 ***987 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MVHNIGSNQS EVFNFTYDTT TSASQQELSV IKEQDRLLPI ANVGRIMKQI LPPNAKISKE 60 AKETMQECVS EFISFVTGEA SDHCRKEKRK TVNGDDVCWA MLNLGFDDYA EPLKKYLHKI 120 RELDGERAHQ NKGASSSSNE EKDHIRNPPQ ETTSNYRSSG NQVPRKANVP PSPSHFNFTV 180 IDKRKSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	2e-62	NF-YB family protein