PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001184.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 188aa    MW: 21070.6 Da    PI: 9.6337
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001184.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.7e-11250455
                           HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                           +h ++Er+RR+++N+ +  Lr++ P     + k+ + a+i   ++e+Ik++q
  Cse_sc001184.1_g050.1  2 SHIAVERNRRRQMNEHLKVLRSMTPCF---YIKRGDQASIIGGVIEFIKEMQ 50
                           89************************9...9*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MSHIAVERNR RRQMNEHLKV LRSMTPCFYI KRGDQASIIG GVIEFIKEMQ LVLQSLESKK  60
RRRSISPSPG PSPKPLLQPE TPQSERSIIS HENIKELGAS CNSPVADVEA KISGSNVILR  120
TVSRRIPGQV VKIVNLLEKL SLEILHLNIS SMEDTVLYSF VIKIGLECQL SVEELAVEVQ  180
KSFSLNLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.17e-72bHLH family protein