PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001199.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 216aa    MW: 24762.2 Da    PI: 9.6193
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001199.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM155.72.1e-48141371128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeelvv+yL +k+++ ++++   i+e+d+++++PwdLp      e+e yfFs+ + ky++gkr+nr+t+sgyWk+tg 
  Cse_sc001199.1_g030.1  14 LPPGFRFHPTDEELVVHYLYHKAQSLPMTI--PIPEADVCRSDPWDLPGD---LEQERYFFSTMEIKYPNGKRSNRTTTSGYWKSTGL 96 
                            79***********************99877..8***************54...46799****************************** PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk+++ + +++++g+kktLvfy+g+ p+g+kt+W+mhey+l
  Cse_sc001199.1_g030.1  97 DKRIIGSqNKQVIGTKKTLVFYRGKPPHGSKTSWIMHEYKL 137
                            ***998757888***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MTKLNFVKNG ALRLPPGFRF HPTDEELVVH YLYHKAQSLP MTIPIPEADV CRSDPWDLPG  60
DLEQERYFFS TMEIKYPNGK RSNRTTTSGY WKSTGLDKRI IGSQNKQVIG TKKTLVFYRG  120
KPPHGSKTSW IMHEYKLASH NQDMGNWVLC RMFQKKIAKN GGMKDEDQMF KVEKTRPVLY  180
EFIGGRRKFD LNLEGDVSSS SCSSGVTKAD EDEVNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.16e-80NAC family protein