PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001261.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 248aa    MW: 27966.8 Da    PI: 6.2326
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001261.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.46e-28168225158
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                            ldDgy+WrKYG+K +k +++pr+Y++Ct++gC+vkk+ver+++d ++++ tY g Hnh
  Cse_sc001261.1_g010.1 168 LDDGYRWRKYGKKAIKCTPNPRNYFKCTTNGCKVKKRVERDRDDSSYIIATYIGLHNH 225
                            59******************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
METCLNLSKL AQKSTMDAFL PLSDQDQTGN PNFSSSSFNC PSITNDDRVY DHTNVDNTLY  60
YNHNLTDDNS NPNTLSLIDH QDSSSSNSLS YLNTNEQTPD HLLEITTDVN ISKSPQISAD  120
AASMTQLTWI ERQLFSFLLA KCSDNSNQKR LNDDTKIGFR IQTALEVLDD GYRWRKYGKK  180
AIKCTPNPRN YFKCTTNGCK VKKRVERDRD DSSYIIATYI GLHNHGVPST TASFSNTCPT  240
GVWTLQYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.13e-32WRKY family protein