PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001261.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 240aa    MW: 27457.6 Da    PI: 7.5269
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001261.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.52.4e-27160218159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            ldDgy+WrKYG+K++k ++ pr+Y++C++ gC+vkk+ver+++d ++++ tY g Hnh+
  Cse_sc001261.1_g030.1 160 LDDGYRWRKYGKKKIKCTPSPRNYFKCSTMGCKVKKRVERDRDDSSYIIATYIGLHNHD 218
                            59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
METCLNLSKL AQKSTMDAFL PLSDQDQTGN PKFSSSSFNC PFITNDDRVY DHTNVDNTLY  60
YNHNLTDSNP NNLSLIDHQD SSSSNSLSYL NTNEQTPDHL LEITRDVNIS KSPQISADAA  120
SMTQLTWIER QLLYDDNSNR ERMHYGAKIG FRIRTALEVL DDGYRWRKYG KKKIKCTPSP  180
RNYFKCSTMG CKVKKRVERD RDDSSYIIAT YIGLHNHDVP STTASMSHTC PTGVWKLQYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.14e-32WRKY family protein