PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001261.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 222aa    MW: 25226.9 Da    PI: 6.5107
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001261.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.23.8e-29142200159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            ldDgy+WrKYG+K++kg+++pr+YY+C++ gC+vkk+ve++++dp++++ tY g Hnhe
  Cse_sc001261.1_g070.1 142 LDDGYKWRKYGKKKIKGTPNPRNYYKCSTIGCKVKKRVEQDRNDPSYMIATYIGLHNHE 200
                            59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MDAFLPLSDE DQIGNPNFSS SSLNHPSNII NDRVYDRINV ENTLYYNHNL NDDNSNPNAL  60
SLIDHQGSSA SNSLSYLNTN EQTPDHLLEI TTDVNISKSP QISADAASMT QRTWIERQLL  120
YEERMNNDTK IGFRIQTALE VLDDGYKWRK YGKKKIKGTP NPRNYYKCST IGCKVKKRVE  180
QDRNDPSYMI ATYIGLHNHE VPSRTASGSN TCPTGVWTLQ YS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.14e-21WRKY family protein