PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001286.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 186aa    MW: 21768.5 Da    PI: 9.2811
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001286.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.42e-1159101954
                            HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                             r RR++i ++f  Lr+l+P a   + + ++ +++Le+A++Y+k L
  Cse_sc001286.1_g030.1  59 ARERRHKISEKFKILRSLIPGA---QTRNMDTVSMLEEAIQYVKFL 101
                            699*******************...9999***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MDFFLQCRNP NFHSSSVVAT NNKSSITFHG KEGEKKRNRS KNKINAKVKL STDPQSVAAR  60
ERRHKISEKF KILRSLIPGA QTRNMDTVSM LEEAIQYVKF LKSQIWLHQT MINFDDYDNA  120
NTRYHHHQDL LPLYQPYDDN HHLSGLPQIE HDILQQLGFP HGSYFKVESV SNMESFSHDH  180
HHVIYP