PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001292.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 431aa MW: 47685.1 Da PI: 5.2057

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001292.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107	1e-33	234	288	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav++LGGse+AtPk +l+ mkv+gLt++hvkSHLQkYR+ Cse_sc001292.1_g020.1 234 KPRMRWTPELHEAFVEAVNKLGGSERATPKGVLKQMKVEGLTIYHVKSHLQKYRT 288 79****************************************************8 PP
2	Myb_DNA-binding	56.3	7.1e-18	236	287	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ Cse_sc001292.1_g020.1 236 RMRWTPELHEAFVEAVNKLGGSeraTPKGVLKQMKvEGLTIYHVKSHLQKYR 287 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MDAQPALSFQ RPGARQLNNH GPAVIRSSPL EEKYPKFSNP QQITMGREFM PPNFTALPPV 60 SSVSGAVGHI FSSSSGMSSD NYFSSITSHE NHSEKAPFVS QSPVLQSTAS SQYMKENNSS 120 WADLVPDFLD YPPNPPIQSR NLEQSIIPLE DLGKQNDWQD WADQLLTEDD TNAMTPDWND 180 ILTDTNIADP EPKMAYHVGA SSTKSMQIQV IPQLSGEACN PMTPSSCGAG NQSKPRMRWT 240 PELHEAFVEA VNKLGGSERA TPKGVLKQMK VEGLTIYHVK SHLQKYRTAR YRPEPSSEEP 300 SERKTTVADF SSLELKTGLE ITEALRLQME VQKRLHEQLE IQRNLQLRLE EQGRHLQMMF 360 EKQCKSGIEK FKASSDVTNG TPDSPAKAES PTLQVNPNEL GLDPVAGPSD EGPSNSGPSD 420 SQPTKRAKVN E

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MDAQPALSFQ RPGARQLNNH GPAVIRSSPL EEKYPKFSNP QQITMGREFM PPNFTALPPV  60
SSVSGAVGHI FSSSSGMSSD NYFSSITSHE NHSEKAPFVS QSPVLQSTAS SQYMKENNSS  120
WADLVPDFLD YPPNPPIQSR NLEQSIIPLE DLGKQNDWQD WADQLLTEDD TNAMTPDWND  180
ILTDTNIADP EPKMAYHVGA SSTKSMQIQV IPQLSGEACN PMTPSSCGAG NQSKPRMRWT  240
PELHEAFVEA VNKLGGSERA TPKGVLKQMK VEGLTIYHVK SHLQKYRTAR YRPEPSSEEP  300
SERKTTVADF SSLELKTGLE ITEALRLQME VQKRLHEQLE IQRNLQLRLE EQGRHLQMMF  360
EKQCKSGIEK FKASSDVTNG TPDSPAKAES PTLQVNPNEL GLDPVAGPSD EGPSNSGPSD  420
SQPTKRAKVN E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	7e-87	G2-like family protein