PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001300.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 1435aa MW: 155315 Da PI: 5.5262

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001300.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.9	5.4e-09	655	696	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +W+ eE e++++ ++G++ +k+I++ ++ +R+ +c+++++k Cse_sc001300.1_g080.1 655 AWSVEEKEIFLNKYSLFGKN-FKKISSFLQ-RRSIADCVEFYYK 696 8***************99.*****.*********98 PP
2	Myb_DNA-binding	33.7	8.3e-11	841	882	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE ++++ k++G++ ++ ++r++ ++t +qck ++ k Cse_sc001300.1_g080.1 841 NWTDEEKSNFIKGLKMYGKN-FSMVSRCVR-TKTSNQCKVYYSK 882 8***************99.*****.******99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1435 aa Download sequence
MPPEIDRKEL KPSLSESDVS AGWKDMPLTP SSCRWPGGGS AVRPFSGHGK GVGEELKTWE 60 TTALPNGNSQ PHVDFVNSWE QLNSGGGEKR PLEKGNSLGS SGLDWKPVKW IRSGSLSSRG 120 SGFSHSNSFE NKMDGQLGSG GGGGSFLQPP VGEAAACVTP NTPDDASSRK KARLGWGEGL 180 AKYEKKKVDP EDVVDKEAGV SSSEPLLPSP SNVSAKSPTL TGFSECASPT TPCSFACSSS 240 PGVDEKASVK AAAVDNDVCN PSVSSCHLSD NHTEEPTFNL ENLELTEAVN LSSALNELLQ 300 SDDTSASTSG FVRSTAMDKL HVWKADISRT LEITESEIDS LENELKSLIP DVRGSCPSPA 360 ATCSLPTDSS GKNTEENSGP TEKADDCVEV LEKHNRVEDL DRESPGTATS KFVESVVLCN 420 SSMNSETVEL RDSSVNLDII PDKAECSQDH GGDNMLGVAT GSSYTTSVVT VRFVELRELN 480 DCLSASNKAT AKSTSEELSK LLPTTSHCAR ICRDTNVSVL KKNFTMRKLF LKFKERVITF 540 KFRAFQHSWK EDLRLLALKK CASKSHKKFE HTDHQKRHSR LTYPDGSFSM VSTTEIVEYM 600 NKLLPDSQVK TYRNELKMPS LILDNRERMS SRFISDNGLV EDPIGIEKEK SVVNAWSVEE 660 KEIFLNKYSL FGKNFKKISS FLQRRSIADC VEFYYKNHKS DLFQKIKKKS KFAKGSSSTT 720 TNTYLVTSGK RLSQATSLDM LGAASAMVAN VGTSSGDGDR LNDFANLCNE QETAAADVLA 780 GICGSISPEA LGSCITSSVD NGDIRHQVRT CQKLGGYLLQ NVGEDESCSD DSCGEEMESC 840 NWTDEEKSNF IKGLKMYGKN FSMVSRCVRT KTSNQCKVYY SKARNLLGLD VIKFEPGSEG 900 TTGANHGGGS DDHEGTCMVD SGSVISHDKS SMDCKMEPQS SELGEEHSES DLNVVNKEPE 960 PLVSDTKSED ELVGERGSNG NLEGAADSEA TDAANLEISP QNTCSDSASG AKVEESEHQL 1020 ANGSTCNGNA IEDLNSTSLY SRGRSLDLTL DRGNGMDLNA SLENMSTQEP VNGLVASNLF 1080 PQDPSVIPKR RTVSQDDVSS RLSFRKSSQR CSSTDGYHLH LPKHSLLDCA ESSQILRGCT 1140 VTVSNNKGIN GSSSYSKTQC NFKLDESFLM PTDDSLQMCN ERRRSSSSDV EKPSGNGDVK 1200 LFGQILTNTS SNKLQPQPVL KANGSAQESE KPNGVKSYNL KFDHHRKLAS LDLTRRNDYS 1260 SGVENLEVYS SVPKTLPLSY QTGFPSLPDS AVLLAKYPAA FTPFSAASKL DQDQQLHSLK 1320 RGNNLNVVSG FQPRKLSSNN GVANYNVFGS NEVLQPFTVD KKLLPGMPRS KELEVMSGVQ 1380 QGIGIMGMNV NVVGGACNGV SDPVAAIRMH YAKTQQFTNG GGESWRSTGS DIGSR

Sequence ? help Back to Top

Protein Sequence Length: 1435 aa Download sequence

MPPEIDRKEL KPSLSESDVS AGWKDMPLTP SSCRWPGGGS AVRPFSGHGK GVGEELKTWE  60
TTALPNGNSQ PHVDFVNSWE QLNSGGGEKR PLEKGNSLGS SGLDWKPVKW IRSGSLSSRG  120
SGFSHSNSFE NKMDGQLGSG GGGGSFLQPP VGEAAACVTP NTPDDASSRK KARLGWGEGL  180
AKYEKKKVDP EDVVDKEAGV SSSEPLLPSP SNVSAKSPTL TGFSECASPT TPCSFACSSS  240
PGVDEKASVK AAAVDNDVCN PSVSSCHLSD NHTEEPTFNL ENLELTEAVN LSSALNELLQ  300
SDDTSASTSG FVRSTAMDKL HVWKADISRT LEITESEIDS LENELKSLIP DVRGSCPSPA  360
ATCSLPTDSS GKNTEENSGP TEKADDCVEV LEKHNRVEDL DRESPGTATS KFVESVVLCN  420
SSMNSETVEL RDSSVNLDII PDKAECSQDH GGDNMLGVAT GSSYTTSVVT VRFVELRELN  480
DCLSASNKAT AKSTSEELSK LLPTTSHCAR ICRDTNVSVL KKNFTMRKLF LKFKERVITF  540
KFRAFQHSWK EDLRLLALKK CASKSHKKFE HTDHQKRHSR LTYPDGSFSM VSTTEIVEYM  600
NKLLPDSQVK TYRNELKMPS LILDNRERMS SRFISDNGLV EDPIGIEKEK SVVNAWSVEE  660
KEIFLNKYSL FGKNFKKISS FLQRRSIADC VEFYYKNHKS DLFQKIKKKS KFAKGSSSTT  720
TNTYLVTSGK RLSQATSLDM LGAASAMVAN VGTSSGDGDR LNDFANLCNE QETAAADVLA  780
GICGSISPEA LGSCITSSVD NGDIRHQVRT CQKLGGYLLQ NVGEDESCSD DSCGEEMESC  840
NWTDEEKSNF IKGLKMYGKN FSMVSRCVRT KTSNQCKVYY SKARNLLGLD VIKFEPGSEG  900
TTGANHGGGS DDHEGTCMVD SGSVISHDKS SMDCKMEPQS SELGEEHSES DLNVVNKEPE  960
PLVSDTKSED ELVGERGSNG NLEGAADSEA TDAANLEISP QNTCSDSASG AKVEESEHQL  1020
ANGSTCNGNA IEDLNSTSLY SRGRSLDLTL DRGNGMDLNA SLENMSTQEP VNGLVASNLF  1080
PQDPSVIPKR RTVSQDDVSS RLSFRKSSQR CSSTDGYHLH LPKHSLLDCA ESSQILRGCT  1140
VTVSNNKGIN GSSSYSKTQC NFKLDESFLM PTDDSLQMCN ERRRSSSSDV EKPSGNGDVK  1200
LFGQILTNTS SNKLQPQPVL KANGSAQESE KPNGVKSYNL KFDHHRKLAS LDLTRRNDYS  1260
SGVENLEVYS SVPKTLPLSY QTGFPSLPDS AVLLAKYPAA FTPFSAASKL DQDQQLHSLK  1320
RGNNLNVVSG FQPRKLSSNN GVANYNVFGS NEVLQPFTVD KKLLPGMPRS KELEVMSGVQ  1380
QGIGIMGMNV NVVGGACNGV SDPVAAIRMH YAKTQQFTNG GGESWRSTGS DIGSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	4e-78	MYB family protein