PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001307.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 341aa    MW: 38716.5 Da    PI: 6.5055
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001307.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.25.7e-5251321128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            + pGfrFhPtdeelv +yLkkk++++ l++ e ik+vdiyk++PwdLp+ + ++ekewyf+++rd+ky+++ r+nr+t sg+Wkatg+
  Cse_sc001307.1_g070.1   5 MLPGFRFHPTDEELVGFYLKKKIQQRVLPI-ELIKQVDIYKYDPWDLPNLAPTGEKEWYFYCPRDRKYRNSARPNRVTGSGFWKATGT 91 
                            579***************************.89***************8888999********************************* PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            d++++s+ +++ +glkk+Lvfy+gra kg ktdW+mhe+rl
  Cse_sc001307.1_g070.1  92 DRPIYSSdGTNCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 132
                            ******955667***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MDDVMLPGFR FHPTDEELVG FYLKKKIQQR VLPIELIKQV DIYKYDPWDL PNLAPTGEKE  60
WYFYCPRDRK YRNSARPNRV TGSGFWKATG TDRPIYSSDG TNCIGLKKSL VFYRGRAAKG  120
IKTDWMMHEF RLPSLTQSQS SPPKKTLDKS LPPNDAWAIC RIFKKTSSMA QRALSHSWIS  180
SLHDSSHLCN NDSSFSPLDI PSYTPINQTS SKLPPFSIPQ TDFPSGFMFS TTDIPTPITT  240
STAAHDITPM MFNLDPDLVG DSSHTSDSMG YVSMSSLQDM QGRIDTEHHD EHLIRPITSF  300
PFSLPSNVHD DWNLNMSWDD SHSPTCPSEI STTYSTDNCY T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.15e-93NAC family protein