PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001321.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 513aa MW: 57172 Da PI: 8.5073

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001321.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.2e-17	60	106	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde l++av ++ g++Wk++a++++ R++ qc +rwqk+l Cse_sc001321.1_g030.1 60 KGGWTPEEDETLKQAVGLFKGKCWKKVAEYFP-DRSEVQCLHRWQKVL 106 688***************************.**********986 PP
2	Myb_DNA-binding	62.9	6.5e-20	112	158	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+++v++vk++G+ W++Ia+ ++ gR +kqc++rw+++l Cse_sc001321.1_g030.1 112 KGPWTQEEDDIIVELVKRYGPTKWSLIAKSLP-GRIGKQCRERWHNHL 158 79****************************.***********97 PP
3	Myb_DNA-binding	50.4	5.1e-16	164	207	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT +E+ l +a++ +G++ W+ Ia+ ++ gRt++ +k++w++ Cse_sc001321.1_g030.1 164 KDAWTLQEEMALMNAHRVHGNK-WAEIAKALP-GRTDNAIKNHWNS 207 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MGGMELEIYC VENKQSTAAS SSSMSEGSSG IVVPRSPRVS SPTATSPPQR RTTGPIRRAK 60 GGWTPEEDET LKQAVGLFKG KCWKKVAEYF PDRSEVQCLH RWQKVLNPEL VKGPWTQEED 120 DIIVELVKRY GPTKWSLIAK SLPGRIGKQC RERWHNHLNP DIKKDAWTLQ EEMALMNAHR 180 VHGNKWAEIA KALPGRTDNA IKNHWNSSLK KKLDFYLATG NLPAISKNDS DVTRTPSTAK 240 PIASSVTPSR VSLSPGPAEY HKVETDTTDD IECSTPSQDI DASSSFIPSG STDSEPIGTK 300 SHPKYDLSHL SRNLVPRFDS CSTRHDGINQ ETLNPTPLQS SAPAYGSLYY EPPQIESFMP 360 TEYGVIYTHW SSRDYNSRCS STPPYAEKCD ALSAQTPESR LKIAAQSFPN TPSILRKRKV 420 HSSASFQKIV KADEVKKVNH DLEESESCDV ATVNNTYNTS PPYRLKYKRK SSLKSVEKQL 480 EFRSDEEICK SETGYADVNL KDNSVTKVSL SAS

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MGGMELEIYC VENKQSTAAS SSSMSEGSSG IVVPRSPRVS SPTATSPPQR RTTGPIRRAK  60
GGWTPEEDET LKQAVGLFKG KCWKKVAEYF PDRSEVQCLH RWQKVLNPEL VKGPWTQEED  120
DIIVELVKRY GPTKWSLIAK SLPGRIGKQC RERWHNHLNP DIKKDAWTLQ EEMALMNAHR  180
VHGNKWAEIA KALPGRTDNA IKNHWNSSLK KKLDFYLATG NLPAISKNDS DVTRTPSTAK  240
PIASSVTPSR VSLSPGPAEY HKVETDTTDD IECSTPSQDI DASSSFIPSG STDSEPIGTK  300
SHPKYDLSHL SRNLVPRFDS CSTRHDGINQ ETLNPTPLQS SAPAYGSLYY EPPQIESFMP  360
TEYGVIYTHW SSRDYNSRCS STPPYAEKCD ALSAQTPESR LKIAAQSFPN TPSILRKRKV  420
HSSASFQKIV KADEVKKVNH DLEESESCDV ATVNNTYNTS PPYRLKYKRK SSLKSVEKQL  480
EFRSDEEICK SETGYADVNL KDNSVTKVSL SAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-130	MYB family protein