PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001340.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 184aa    MW: 20555.1 Da    PI: 5.2572
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001340.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.1e-172170155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           ++++G+r  +++g+Wv+eIr+p++   +kr++lg++ t+e+Aa+a++ a+++l+g
  Cse_sc001340.1_g040.1 21 PCFHGIR--SRSGKWVSEIREPRK---SKRIWLGTYPTPEMAAAAYDVAALSLKG 70
                           5788995..678*********843...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MTSSSASSRT GRTPHMTGRH PCFHGIRSRS GKWVSEIREP RKSKRIWLGT YPTPEMAAAA  60
YDVAALSLKG RDTVLNFPHF VERYQVPALP EPDLIRSAAG AAATLMKCSV DEKVVCQAPG  120
DFSVVADHVI NNYEFMDEEA IFDTPNLYAD MAEGMLMSPP RQLLSTYDHS ALEDSYDFDD  180
LWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-44ERF family protein