PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001345.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 1080aa MW: 119642 Da PI: 6.8117

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001345.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.4	1.1e-17	29	117	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 ffkv+ d++k+ lvlp +fa + ++k +k +le++sg++W+vk+ +k g l kGW++F++a++Lk gD +vF+++ +s Cse_sc001345.1_g060.1 29 FFKVMFGDDYSKL--LVLPPRFAHTVQNK--VGKSTRLENSSGEKWDVKF--NKVNGLLALVKGWNKFASAHNLKLGDLLVFHYIMES 110 7888877777665..9*****777766..4567***********..999999************************9888 PP EE..EEEEE CS B3 89 efelvvkvf 97 f vv+++ Cse_sc001345.1_g060.1 111 HF--VVMMY 117 88..77765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1080 aa Download sequence
MDEACEECTQ NCITMHKLNK NPSAVATTFF KVMFGDDYSK LLVLPPRFAH TVQNKVGKST 60 RLENSSGEKW DVKFNKVNGL LALVKGWNKF ASAHNLKLGD LLVFHYIMES HFVVMMYGKS 120 GCPEIRHFGI SQRQTKETKQ KNKLIEDDIP SNNGTHDHHY SKGSCSQSEQ SQQIKQKKRK 180 FTMPENVETT DTDHIAASPS QPGTSGSEKE KSQISDQFEP LVEKAGHDNM VFETHTTVKQ 240 VSMVDKDDIL LQGETRKNNL QTVAVGSDGG SKTNLADNTV SETQATVKQI FPVYKDDLHL 300 QNENRKNNLQ TEAVHSDGGS KTDLADNMVS ETLATVKQIC PVYKDDLHLQ NENRKNNLQT 360 EVVGSDGGSR KNLASNMVSE TSATVKQIFS VEKDDLYLQD ESRKNNLQPK VVGCDGSSTK 420 NLVAGGGGSD DTVKTEIWKR VEEKMAKRKE INVAQTEASN SETRASVTVE KYKESLVTPS 480 EATYSDLLKK RLRNDDNSVT PAKIQKKEPD TSAKMQKNEL DILANMQKNK PVTSANMLKN 540 EPDTSAKMQK NEPDTSGSRL PNLSKPTSAE YNLLNIVFFF VLNHVVTIYQ NSAADWVEVM 600 TKESTMNHGS GSKPNDSKMG LNVQTKENEN ALIRVKDEPE EYDEPPQYNS GNSSFSAVMT 660 SFKYLELPKR VKWHYRSKVV LLRNGADLWP VLFETSLGIK ALTQNWELFA KAKGIKPGDK 720 CDFVLESSTQ YKRNSCREEH PDCNSRVSAI VSALEKIQLT PKFRGSEIIQ LQNYETATFE 780 DIAYEHSRAY ISPLEKAKYS VSEEGVDGSG DTHTTDATFK ESLVSAGAGI SLVDYVVASA 840 KITKNPPIGF ALTCPHGHHA VPDGPLGFCS AGNVAIAAIY AQRVHGLQRV FIIDFGAHPG 900 KGTHDVFYDD PDVFFLSIHQ DGILPGAGNI DDIGCGNGVG ATLNLPLPGY SGDFVMQNVF 960 YNVIVPCIQR FKPDIILVSA GYDGHVQDRQ SKLQFKTRTY YMLASGIKKL AKDLCGGRCV 1020 FFLEGGYNLE SLSNSVAESF RGLIGEPSNS AEHDCRNFVI MEPYLGARQA VEKIKQIHSL

Sequence ? help Back to Top

Protein Sequence Length: 1080 aa Download sequence

MDEACEECTQ NCITMHKLNK NPSAVATTFF KVMFGDDYSK LLVLPPRFAH TVQNKVGKST  60
RLENSSGEKW DVKFNKVNGL LALVKGWNKF ASAHNLKLGD LLVFHYIMES HFVVMMYGKS  120
GCPEIRHFGI SQRQTKETKQ KNKLIEDDIP SNNGTHDHHY SKGSCSQSEQ SQQIKQKKRK  180
FTMPENVETT DTDHIAASPS QPGTSGSEKE KSQISDQFEP LVEKAGHDNM VFETHTTVKQ  240
VSMVDKDDIL LQGETRKNNL QTVAVGSDGG SKTNLADNTV SETQATVKQI FPVYKDDLHL  300
QNENRKNNLQ TEAVHSDGGS KTDLADNMVS ETLATVKQIC PVYKDDLHLQ NENRKNNLQT  360
EVVGSDGGSR KNLASNMVSE TSATVKQIFS VEKDDLYLQD ESRKNNLQPK VVGCDGSSTK  420
NLVAGGGGSD DTVKTEIWKR VEEKMAKRKE INVAQTEASN SETRASVTVE KYKESLVTPS  480
EATYSDLLKK RLRNDDNSVT PAKIQKKEPD TSAKMQKNEL DILANMQKNK PVTSANMLKN  540
EPDTSAKMQK NEPDTSGSRL PNLSKPTSAE YNLLNIVFFF VLNHVVTIYQ NSAADWVEVM  600
TKESTMNHGS GSKPNDSKMG LNVQTKENEN ALIRVKDEPE EYDEPPQYNS GNSSFSAVMT  660
SFKYLELPKR VKWHYRSKVV LLRNGADLWP VLFETSLGIK ALTQNWELFA KAKGIKPGDK  720
CDFVLESSTQ YKRNSCREEH PDCNSRVSAI VSALEKIQLT PKFRGSEIIQ LQNYETATFE  780
DIAYEHSRAY ISPLEKAKYS VSEEGVDGSG DTHTTDATFK ESLVSAGAGI SLVDYVVASA  840
KITKNPPIGF ALTCPHGHHA VPDGPLGFCS AGNVAIAAIY AQRVHGLQRV FIIDFGAHPG  900
KGTHDVFYDD PDVFFLSIHQ DGILPGAGNI DDIGCGNGVG ATLNLPLPGY SGDFVMQNVF  960
YNVIVPCIQR FKPDIILVSA GYDGHVQDRQ SKLQFKTRTY YMLASGIKKL AKDLCGGRCV  1020
FFLEGGYNLE SLSNSVAESF RGLIGEPSNS AEHDCRNFVI MEPYLGARQA VEKIKQIHSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53310.1	1e-12	B3 family protein