PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001368.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 388aa MW: 42980.8 Da PI: 4.2729

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001368.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	155.2	2.8e-48	4	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 l pGfrFhPtdeelv+++Lk+kv gk+l evi+ev+iy++ PwdLp +k+k ++ ew+fF+++++ky++g+r+nrat++gyWkat Cse_sc001368.1_g060.1 4 LSPGFRFHPTDEELVMYFLKRKVLGKRLVS-EVIAEVNIYEFSPWDLPdmSKLKYGDLEWFFFCPKSRKYSSGSRTNRATETGYWKAT 90 579**********************988.99**********95337777999************************** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 gkd+ev+ k++ v ktLvf+ g++pkg++tdWv+heyr+ Cse_sc001368.1_g060.1 91 GKDREVKY-KDKIVAAIKTLVFHLGHSPKGTRTDWVLHEYRM 131 ****.8889999**********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MKKLSPGFRF HPTDEELVMY FLKRKVLGKR LVSEVIAEVN IYEFSPWDLP DMSKLKYGDL 60 EWFFFCPKSR KYSSGSRTNR ATETGYWKAT GKDREVKYKD KIVAAIKTLV FHLGHSPKGT 120 RTDWVLHEYR MDDKDLANAG VIQDTFVLCR LFEKSGLGPK NGAQYGAPFE EEEWDNMDDS 180 EVISFQSSAM ITTDTFNSNA ALTNMALTEP APSTVTSSDS ERLVVQVGAN KTLYSNASHS 240 VVTNMTTTEP GPSNVTSDNE RRLVLFGATK TLNSNASSSG VTNMTSTEAG PSTITFPENE 300 ADLYAAANDD VLLDHEWTDS ILQITNTQAM EDCNVENVIT DAPNGDDLIY LDDLSLDGFD 360 MFPAEGSADF NADAFFADDL DGFLAGFV

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MKKLSPGFRF HPTDEELVMY FLKRKVLGKR LVSEVIAEVN IYEFSPWDLP DMSKLKYGDL  60
EWFFFCPKSR KYSSGSRTNR ATETGYWKAT GKDREVKYKD KIVAAIKTLV FHLGHSPKGT  120
RTDWVLHEYR MDDKDLANAG VIQDTFVLCR LFEKSGLGPK NGAQYGAPFE EEEWDNMDDS  180
EVISFQSSAM ITTDTFNSNA ALTNMALTEP APSTVTSSDS ERLVVQVGAN KTLYSNASHS  240
VVTNMTTTEP GPSNVTSDNE RRLVLFGATK TLNSNASSSG VTNMTSTEAG PSTITFPENE  300
ADLYAAANDD VLLDHEWTDS ILQITNTQAM EDCNVENVIT DAPNGDDLIY LDDLSLDGFD  360
MFPAEGSADF NADAFFADDL DGFLAGFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	2e-84	NAC family protein