PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001370.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 311aa    MW: 36113 Da    PI: 8.1057
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001370.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.2e-05149168120
                            EEETTTTEEESSHHHHHHHH CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                            ++C+ C+k+F+r  n++ H+
  Cse_sc001370.1_g010.1 149 FVCSLCNKTFNRYNNMQMHM 168
                            89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MYTMCFEASP FFEWLKPSLP SSYDTMMVSN EQDFAHKTIE CLPLLSRLLE KDETNRVLKI  60
KEEDNIDKVT VSLHIGLPSY GESTTENLVS TNKSYDEFKE EDDDHKISDM KVKFSNHNNG  120
LYNIVSDHDH QTRFWIPTPT QILVGPMQFV CSLCNKTFNR YNNMQMHMWG HGSEYRKGPE  180
SLKGTQPAAM LRLPCYCCAQ GCKNNINHPR AKPLKDFRTL QTHYKRKHGA KPFTCRKYCA  240
KKFAVKGDWR THEKNCGKLW YCTCGSDFKH KRSLKDHIRS FGNGHSPHPR LDGFDHDDKE  300
CVTGSEDEIM H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08290.11e-120C2H2 family protein