PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001393.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 246aa    MW: 26857.6 Da    PI: 4.7503
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001393.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19e-1857107155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            + y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  Cse_sc001393.1_g030.1  57 PVYRGVRMRA-WGKWVSEIREPKK---KSRIWLGTFAEPEMAARAHDVAALSIKG 107
                            68*****998.**********854...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDESTTTTLP DPFTNQTGSP EPNPKRVKRV QENPNDHDQN NDENSTTSTK TNNSKHPVYR  60
GVRMRAWGKW VSEIREPKKK SRIWLGTFAE PEMAARAHDV AALSIKGKTA ILNFPELAHI  120
LPRPESCSPR DIQAAATKAA SMQIGGAATT PPSTPSTSSS SSCSTLTSSS SMTSLVTADH  180
EVSTAPAEEL SEIVELPSLG ASYDSAESRD DFVFVDSVWD YYSSPPPWPE ETAFSGGFFF  240
DTLLWQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-58ERF family protein