PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001420.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YB
Protein Properties Length: 175aa    MW: 19054.3 Da    PI: 8.4614
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001420.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB175.55.4e-5528121295
                  NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 
                            reqdrflPian+srimkk +Pan+ki+kdaketvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGf+dy+eplk yl +
  Cse_sc001420.1_g020.1  28 REQDRFLPIANISRIMKKGVPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFQDYIEPLKRYLIR 115
                            89************************************************************************************** PP

                  NF-YB  90 yreleg 95 
                            yre ++
  Cse_sc001420.1_g020.1 116 YREGDT 121
                            **9665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MAEGPASPCG GGSHESGGDM SPRAGNAREQ DRFLPIANIS RIMKKGVPAN GKIAKDAKET  60
VQECVSEFIS FITSEASDKC QKEKRKTING DDLLWAMATL GFQDYIEPLK RYLIRYREGD  120
TKGSAKGQDG SASRNGMQPD LNAQLASQGF YSQGLTYGNS QRQAQHLMVT MQGRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.12e-84NF-YB family protein